Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSSTUP00000001491Si:ch73-252p3.1. (1216 aa)    
Predicted Functional Partners:
LOC115199073
Apoptotic protease-activating factor 1-like.
    
 0.881
LOC115180292
Apoptotic protease-activating factor 1-like.
    
 0.881
APPL2
DCC-interacting protein 13-beta-like.
    
 0.829
appl1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
    
 0.829
LOC115196952
DCC-interacting protein 13-beta-like.
    
 0.829
LOC115151041
Homeobox protein ANF-1-like.
    
 0.829
ENSSTUP00000079615
Baculoviral IAP repeat containing 6.
   
 0.743
LOC115167216
Tumor necrosis factor receptor type 1-associated DEATH domain protein.
    
 0.617
LOC115203119
Tumor necrosis factor receptor type 1-associated DEATH domain protein-like.
    
 0.617
LOC115198276
RING finger protein 227-like.
    
  0.614
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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