Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COLEC12Collectin-12-like. (764 aa)    
Predicted Functional Partners:
LOC115182485-2
Collectin-10-like.
  
  
 
0.831
LOC115182485
Collectin-10-like.
  
  
 
0.829
mrc1
Mannose receptor C-type 1.
     
  0.796
ENSSTUP00000028943
annotation not available
     
  0.796
ENSSTUP00000028986
annotation not available
     
  0.796
ENSSTUP00000029297
annotation not available
     
  0.796
colec11
Collectin subfamily member 11.
     
  0.796
LOC115172839
Collectin-11-like.
     
  0.796
LOC115197598
C-type mannose receptor 2-like.
     
  0.754
LOC115196037
Secretory phospholipase A2 receptor-like.
     
  0.754
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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