close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115207467Usher syndrome type-1G protein homolog. (484 aa)    
Predicted Functional Partners:
ENSSTUP00000042341
Usher syndrome 1C.
    
 0.950
LOC115192778
Harmonin-like.
    
 0.950
ENSSTUP00000041984
annotation not available
   
 0.778
ENSSTUP00000098450
annotation not available
   
 0.778
ENSSTUP00000103326
Myosin VIIAb.
   
 0.778
LOC115161451
Unconventional myosin-X-like.
   
 0.757
ENSSTUP00000040863
Myosin XVB.
   
 0.757
LOC115158894
Unconventional myosin-VIIa-like.
   
 0.757
ENSSTUP00000052748
Pleckstrin homology, MyTH4 and FERM domain containing H3.
   
 0.757
LOC115155404
Unconventional myosin-X-like.
   
 0.757
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.