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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM236Transmembrane protein 236. (394 aa)    
Predicted Functional Partners:
ENSSTUP00000013955
Intraflagellar transport 80 homolog (Chlamydomonas).
      
 0.540
ENSSTUP00000039137
Zinc finger, FYVE domain containing 26.
      
 0.499
lrrc14b
Leucine rich repeat containing 14B.
      
 0.431
PRPF6
pre-mRNA processing factor 6.
      
 0.412
igsf5
Immunoglobulin superfamily member 5.
      
 0.412
prpf6
pre-mRNA processing factor 6.
      
 0.412
LOC115163500
Immunoglobulin superfamily member 5-like.
      
 0.412
ENSSTUP00000002206
Solute carrier family 10 member 7.
      
 0.410
ENSSTUP00000090321
annotation not available
      
 0.400
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.