Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM236Transmembrane protein 236. (394 aa)    
Predicted Functional Partners:
LOC115194165
Sex hormone-binding globulin-like.
    
   0.668
ENSSTUP00000039137
Zinc finger, FYVE domain containing 26.
      
 0.651
ENSSTUP00000013955
Intraflagellar transport 80 homolog (Chlamydomonas).
      
 0.625
igsf5
Immunoglobulin superfamily member 5.
      
 0.593
LOC115163500
Immunoglobulin superfamily member 5-like.
      
 0.593
LOC115163386
Calcium-binding protein 8.
      
 0.593
LOC115206309
Calcium-binding protein 8-like.
      
 0.593
ENSSTUP00000029771
Kinase suppressor of ras 2.
      
 0.592
LOC115200503
Kinase suppressor of Ras 2-like.
      
 0.592
ENSSTUP00000090321
annotation not available
      
 0.586
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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