STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115191783SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5. (1042 aa)    
Predicted Functional Partners:
pole3
DNA polymerase epsilon 3, accessory subunit.
    
 0.980
ENSSTUP00000071016
Bromodomain adjacent to zinc finger domain, 1A.
    
 0.976
ENSSTUP00000115893
Bromodomain adjacent to zinc finger domain, 1A.
    
 0.976
LOC115152229
Cat eye syndrome critical region protein 2 homolog.
    
 0.965
LOC115197431
Cat eye syndrome critical region protein 2-like.
    
 0.965
LOC115163200
Tyrosine-protein kinase BAZ1B-like.
   
 0.956
LOC115206145
Tyrosine-protein kinase BAZ1B-like.
   
 0.956
fancm
FA complementation group M.
  
 0.948
RBBP4
Histone-binding protein RBBP4-like.
   
 0.942
LOC115188778
Histone-binding protein RBBP7.
   
 0.942
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.