Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000001580Ankyrin repeat and sterile alpha motif domain containing 4B. (440 aa)    
Predicted Functional Partners:
ENSSTUP00000042341
Usher syndrome 1C.
   
 0.949
LOC115192778
Harmonin-like.
   
 0.949
LOC115161451
Unconventional myosin-X-like.
   
 0.693
ENSSTUP00000040863
Myosin XVB.
   
 0.693
ENSSTUP00000041984
annotation not available
   
 0.693
LOC115158894
Unconventional myosin-VIIa-like.
   
 0.693
ENSSTUP00000052748
Pleckstrin homology, MyTH4 and FERM domain containing H3.
   
 0.693
LOC115155404
Unconventional myosin-X-like.
   
 0.693
myo10
Myosin X.
   
 0.693
ENSSTUP00000081110
Myosin VIIBb.
   
 0.693
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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