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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iydIodotyrosine deiodinase. (317 aa)    
Predicted Functional Partners:
rfk
Riboflavin kinase.
    
 0.939
RFK
Riboflavin kinase-like.
    
 0.939
ENSSTUP00000040632
Epoxide hydrolase 2, cytoplasmic.
  
 
 0.936
ENSSTUP00000051424
Epoxide hydrolase 2, cytoplasmic.
  
 
 0.936
metap1d
Methionyl aminopeptidase type 1D, mitochondrial.
  
 
 0.936
ENSSTUP00000085785
Methionyl aminopeptidase type 1D (mitochondrial).
  
 
 0.936
UROS
Uroporphyrinogen III synthase.
  
 
 0.935
LOC115184969
uroporphyrinogen-III synthase-like.
  
 
 0.935
ENSSTUP00000030515
Uroporphyrinogen decarboxylase.
    
 0.931
LOC115157026
Uroporphyrinogen decarboxylase-like.
    
 0.931
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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