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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115197069Uncharacterized LOC115197069. (364 aa)    
Predicted Functional Partners:
nuf2
NUF2 component of NDC80 kinetochore complex.
   
 
 0.975
spc25
SPC25 component of NDC80 kinetochore complex.
   
 
 0.972
LOC115164996
Kinetochore protein NDC80 homolog.
   
 
 0.948
ENSSTUP00000083680
NDC80 kinetochore complex component.
   
 
 0.948
LOC115171359
Kinetochore protein Spc24-like.
   
 
 0.939
LOC115171359-2
Kinetochore protein Spc24-like.
   
 
 0.939
ENSSTUP00000046709
annotation not available
    
 
 0.935
LOC115148780
Protein MIS12 homolog.
    
 
 0.935
LOC115172676
Mitotic checkpoint serine/threonine-protein kinase BUB1 beta-like.
   
 0.894
ENSSTUP00000054069
annotation not available
   
 0.894
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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