STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115197104Male-specific lethal 1-like 1. (523 aa)    
Predicted Functional Partners:
MSL3
Male-specific lethal 3 homolog.
    
 0.982
MSL3-2
Male-specific lethal 3 homolog.
    
 0.982
MSL2
E3 ubiquitin-protein ligase MSL2-like.
    
 0.976
LOC115190082
E3 ubiquitin-protein ligase MSL2-like.
    
 0.976
LOC115190082-2
E3 ubiquitin-protein ligase MSL2-like.
    
 0.976
ENSSTUP00000043571
DEAH (Asp-Glu-Ala-His) box helicase 9.
   
 0.881
ENSSTUP00000003822
K(lysine) acetyltransferase 7b.
    
 0.860
LOC115200954
Histone acetyltransferase KAT7-like.
    
 0.860
KAT6B
Lysine acetyltransferase 6B.
    
 0.860
ENSSTUP00000020559
K(lysine) acetyltransferase 6B.
    
 0.860
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.