Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000001663Proteasome activator subunit 1. (239 aa)    
Predicted Functional Partners:
LOC115195675
Proteasome activator complex subunit 2-like.
  
0.998
ENSSTUP00000059378
annotation not available
  
0.998
LOC115175861
Proteasome subunit beta type-4-like.
   
 0.982
ENSSTUP00000100667
Proteasome 20S subunit beta 4.
   
 0.982
LOC115208672
Proteasome subunit beta type-3-like.
   
 0.979
psma5
Proteasome 20S subunit alpha 5.
   
 0.979
LOC115178397
Proteasome subunit beta type-3.
   
 0.979
ENSSTUP00000051725
Proteasome 20S subunit beta 9a.
   
 0.979
LOC115175923
Proteasome subunit beta type-6-B like protein.
   
 0.979
LOC115173551
Proteasome subunit beta type-6-A like protein.
   
 0.979
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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