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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115191707S-methyl-5'-thioadenosine phosphorylase. (292 aa)    
Predicted Functional Partners:
srm
Spermidine synthase.
  
 
 0.947
ENSSTUP00000007488
Spermine synthase.
  
 
 0.939
ENSSTUP00000093626
annotation not available
  
 
 0.939
mri1
Methylthioribose-1-phosphate isomerase 1.
  
 
 0.927
ENSSTUP00000040632
Epoxide hydrolase 2, cytoplasmic.
  
 
 0.902
ENSSTUP00000051424
Epoxide hydrolase 2, cytoplasmic.
  
 
 0.902
LOC115205755
Elongation factor 1-gamma-like.
  
 
 0.868
LOC115166697
Elongation factor 1-gamma.
  
 
 0.868
LOC115197321
1-aminocyclopropane-1-carboxylate synthase-like protein 1.
    
 0.864
LOC115192728
Alpha-aminoadipic semialdehyde synthase, mitochondrial-like.
    
  0.857
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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