Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000001681annotation not available (365 aa)    
Predicted Functional Partners:
miga2
Mitoguardin 2.
      
 0.622
LOC115197364
Class E basic helix-loop-helix protein 41-like.
    
 
 0.610
LOC115152166
Class E basic helix-loop-helix protein 41-like.
    
 
 0.610
LOC115154014
Interferon regulatory factor 1-like.
      
 0.568
IRF1
Interferon regulatory factor 1-like.
      
 0.568
ENSSTUP00000054067
annotation not available
      
 0.559
LOC115176960
Ubiquitin-conjugating enzyme E2 E2.
   
  
 0.557
LOC115173781
Nuclear receptor subfamily 1 group D member 2-like.
   
  
 0.557
LOC115176961
Nuclear receptor subfamily 1 group D member 2-like.
   
  
 0.557
LOC115175689
Nuclear receptor subfamily 1 group D member 2-like.
   
  
 0.557
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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