Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000001683annotation not available (103 aa)    
Predicted Functional Partners:
LOC115192082
40S ribosomal protein S6.
   
 0.999
LOC115202045
40S ribosomal protein S6-like.
   
 0.999
rps7
40S ribosomal protein S7.
   
 0.998
rps9
Ribosomal protein S9.
   
 0.998
RPS3A
40S ribosomal protein S3a.
   
 0.998
ENSSTUP00000002398
annotation not available
   
 0.998
ENSSTUP00000004093
Ribosomal protein L39.
   
 0.998
ENSSTUP00000004241
annotation not available
   
 0.998
LOC115157648
40S ribosomal protein S8-like.
   
 0.998
ENSSTUP00000016141
Ribosomal protein S3A.
   
 0.998
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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