STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115198872Podocalyxin-like. (502 aa)    
Predicted Functional Partners:
LOC115206168
Na(+)/H(+) exchange regulatory cofactor NHE-RF2-like.
    
 
 0.685
LOC115147900
Na(+)/H(+) exchange regulatory cofactor NHE-RF2-like.
    
 
 0.685
SLC9A3R2
SLC9A3 regulator 2.
    
 
 0.685
LOC115171413
Na(+)/H(+) exchange regulatory cofactor NHE-RF1-like.
    
 
 0.685
LOC115202291
Na(+)/H(+) exchange regulatory cofactor NHE-RF1-like.
    
 
 0.685
LOC115171745
Na(+)/H(+) exchange regulatory cofactor NHE-RF2-like.
    
 
 0.685
LOC115201667
Na(+)/H(+) exchange regulatory cofactor NHE-RF1-like.
    
 
 0.685
LOC115153488
Na(+)/H(+) exchange regulatory cofactor NHE-RF1-like.
    
 
 0.685
slf1
SMC5-SMC6 complex localization factor 1.
   
 0.677
ENSSTUP00000070137
AT rich interactive domain 4A (RBP1-like).
    
 0.667
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.