Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000001688annotation not available (266 aa)    
Predicted Functional Partners:
LOC115176412
Uncharacterized LOC115176412.
   
 0.632
LOC115154175
Roundabout homolog 1-like.
   
 0.632
ENSSTUP00000014945
annotation not available
   
 0.632
ENSSTUP00000021443
Roundabout, axon guidance receptor, homolog 1 (Drosophila).
   
 0.632
ENSSTUP00000021919
Roundabout, axon guidance receptor, homolog 2 (Drosophila).
   
 0.632
LOC115155358
Junctional adhesion molecule B-like.
   
 0.632
robo4
Roundabout guidance receptor 4.
   
 0.632
robo3
Roundabout guidance receptor 3.
   
 0.632
ENSSTUP00000042146
annotation not available
   
 0.632
ENSSTUP00000042329
annotation not available
   
 0.632
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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