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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000001705annotation not available (405 aa)    
Predicted Functional Partners:
ENSSTUP00000001683
annotation not available
    
  0.698
LOC115169781
Ubiquitin-like protein FUBI.
    
  0.698
ENSSTUP00000060436
FAU ubiquitin like and ribosomal protein S30 fusion a.
    
  0.698
ENSSTUP00000077803
FAU ubiquitin like and ribosomal protein S30 fusion b.
    
  0.698
rag2
Recombination activating 2.
   
 0.658
babam1
BRISC and BRCA1 A complex member 1.
    
 0.612
LOC115155632
BRCA1-associated RING domain protein 1-like.
    
  0.585
rpl21
60S ribosomal protein L21.
   
   0.578
rpl21-2
60S ribosomal protein L21.
   
   0.578
LOC115180632
Nectin-2-like.
    
  0.566
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.