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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000001720annotation not available (144 aa)    
Predicted Functional Partners:
ENSSTUP00000057904
B9 protein domain 1.
     
 0.932
ahi1
Abelson helper integration site 1.
     
 0.932
ENSSTUP00000112184
ATM serine/threonine kinase.
    
 0.925
tctn2
Tectonic family member 2.
     
 0.918
LOC115180980
Meckelin-like.
   
 
 0.891
LOC115180984
Meckelin-like.
   
 
 0.891
ENSSTUP00000015989
Coiled-coil and C2 domain containing 2A.
     
 0.889
ENSSTUP00000005676
annotation not available
     
 0.888
tctn1
Tectonic family member 1.
     
 0.888
tctn3
Tectonic family member 3.
     
 0.887
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.