Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000001720annotation not available (144 aa)    
Predicted Functional Partners:
ENSSTUP00000057904
B9 protein domain 1.
     
 0.962
ahi1
Abelson helper integration site 1.
     
 0.962
tctn1
Tectonic family member 1.
     
 0.937
LOC115180980
Meckelin-like.
   
 
 0.937
LOC115180984
Meckelin-like.
   
 
 0.937
ENSSTUP00000112184
ATM serine/threonine kinase.
    
 0.926
tctn3
Tectonic family member 3.
     
 0.925
LOC115153716
B9 domain-containing protein 2-like.
     
 0.916
LOC115204364
B9 domain-containing protein 2.
     
 0.916
ENSSTUP00000015989
Coiled-coil and C2 domain containing 2A.
     
 0.912
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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