Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115191712Inorganic pyrophosphatase-like. (341 aa)    
Predicted Functional Partners:
LOC115161138
ATP synthase subunit O, mitochondrial-like.
  
 
 0.934
ENSSTUP00000018589
ATP synthase peripheral stalk subunit OSCP.
  
 
 0.934
ATP6
ATP synthase F0 subunit 6.
  
 
 0.925
LOC115198854
ATP synthase subunit gamma, mitochondrial-like.
  
 
 0.920
LOC115179991
ATP synthase subunit gamma, mitochondrial-like.
  
 
 0.920
lhpp
Phospholysine phosphohistidine inorganic pyrophosphate phosphatase.
     
 0.902
ENSSTUP00000092560
annotation not available
     
 0.902
LOC115159090
V-type proton ATPase subunit D-like.
   
 
  0.891
LOC115174611
V-type proton ATPase subunit D.
   
 
  0.891
LOC115197047
ATP synthase F(0) complex subunit C3, mitochondrial-like.
  
 
 0.886
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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