Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000001724Si:dkey-280e21.3. (468 aa)    
Predicted Functional Partners:
ENSSTUP00000053905
annotation not available
    
 0.953
ENSSTUP00000070599
Intersectin 2b.
    
 0.953
ENSSTUP00000040064
Intersectin 1 (SH3 domain protein).
    
 0.920
ENSSTUP00000091247
Intersectin 1 (SH3 domain protein).
    
 0.920
LOC115204013
Actin-related protein 2/3 complex subunit 3-B.
    
 0.911
ENSSTUP00000078911
Actin related protein 2/3 complex, subunit 3.
    
 0.911
arpc2
Actin related protein 2/3 complex subunit 2.
    
 0.862
ENSSTUP00000003403
G protein-coupled bile acid receptor 1.
    
 0.862
arpc2-2
Actin related protein 2/3 complex subunit 2.
    
 0.862
gpbar1
G protein-coupled bile acid receptor 1.
    
 0.862
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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