Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115197121Junction plakoglobin-like. (729 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta-1.
  
0.984
CTNNB1-2
Catenin beta-1-like.
  
0.984
ENSSTUP00000007114
annotation not available
   
 0.974
LOC115202968
B-cadherin-like.
   
 0.974
LOC115167390
B-cadherin-like.
   
 0.974
LOC115157892
Desmoglein-2-like.
   
 0.971
ENSSTUP00000024925
annotation not available
   
 0.971
LOC115169647
Desmoglein-2-like.
   
 0.971
LOC115157122
Desmoglein-2-like.
   
 0.971
LOC115158616
Desmocollin-2-like.
   
 0.959
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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