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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000001754Tetratricopeptide repeat domain 7A. (893 aa)    
Predicted Functional Partners:
ENSSTUP00000065868
Phosphatidylinositol 4-kinase, catalytic, alpha a.
    
 
 0.947
ENSSTUP00000075526
annotation not available
    
 
 0.947
FAM126A
Hyccin-like.
    
 
 0.896
LOC115175365
Hyccin-like.
    
 
 0.896
ENSSTUP00000044532
EFR3 homolog Ba (S. cerevisiae).
   
 
 0.817
LOC115187073
Protein EFR3 homolog B.
   
 
 0.817
efr3a
EFR3 homolog A.
   
 
 0.817
FAM126B
Family with sequence similarity 126 member B.
    
 
 0.788
TMEM150A
Transmembrane protein 150A.
      
 0.525
LOC115164284
Transmembrane protein 150A-like.
      
 0.525
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.