Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115191714Integrator complex subunit 12-like. (495 aa)    
Predicted Functional Partners:
LOC115168695
Integrator complex subunit 5-like.
    
 0.995
ENSSTUP00000022723
Integrator complex subunit 1.
    
 0.995
ENSSTUP00000057413
Integrator complex subunit 1.
    
 0.995
LOC115205582
Integrator complex subunit 5-like.
    
 0.995
LOC115175844
Integrator complex subunit 3-like.
    
 0.989
LOC115173622
Integrator complex subunit 3.
    
 0.989
ints9
Integrator complex subunit 9.
   
 0.988
ints14
Integrator complex subunit 14.
    
 0.987
ints8
Integrator complex subunit 8.
   
 0.986
LOC115155447
Integrator complex subunit 6-like.
    
 0.981
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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