Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
c5h4orf54Chromosome 5 C4orf54 homolog. (1626 aa)    
Predicted Functional Partners:
LOC115199797
Pescadillo homolog.
   
 0.607
PES1
Pescadillo homolog.
   
 0.607
ENSSTUP00000012855
WD repeat domain 18.
   
 0.598
wdr18
WD repeat domain 18.
   
 0.598
LOC115180981
Testis-expressed protein 10 homolog.
    
 0.595
LOC115180981-2
Testis-expressed protein 10 homolog.
    
 0.595
LOC115176902
Nucleolar GTP-binding protein 2-like.
   
 0.525
LOC115177191
Nucleolar GTP-binding protein 2-like.
   
 0.525
ENSSTUP00000045803
annotation not available
    
  0.518
LOC115165496
Rho guanine nucleotide exchange factor 25-like.
    
  0.518
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
Server load: low (14%) [HD]