Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ENSSTUP00000001771TruB pseudouridine (psi) synthase family member 1. (274 aa)    
Predicted Functional Partners:
nop58
NOP58 ribonucleoprotein.
  
 
 0.981
LOC115153946
H/ACA ribonucleoprotein complex subunit 2-like protein.
  
 0.980
LOC115148483
H/ACA ribonucleoprotein complex subunit 2-like protein.
  
 0.980
GAR1
H/ACA ribonucleoprotein complex subunit 1-like.
   
 0.974
ENSSTUP00000077830
GAR1 homolog, ribonucleoprotein.
   
 0.974
ENSSTUP00000044375
NOP56 ribonucleoprotein homolog.
   
 
 0.960
nop56
NOP56 ribonucleoprotein.
   
 
 0.960
ENSSTUP00000064033
WD repeat domain 12.
   
 
 0.955
PUS1
tRNA pseudouridine synthase A-like.
  
 0.951
ENSSTUP00000079150
Pseudouridine synthase 1.
  
 0.951
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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