Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115194228tRNA methyltransferase 10 homolog A-like. (337 aa)    
Predicted Functional Partners:
wdr4
WD repeat domain 4.
   
 
 0.937
hsd17b10
Hydroxysteroid 17-beta dehydrogenase 10.
    
 0.925
mettl1
Methyltransferase like 1.
   
 
 0.921
ENSSTUP00000069501
annotation not available
   
 
 0.921
mrps31
Mitochondrial ribosomal protein S31.
   
 
 0.903
mrps25
Mitochondrial ribosomal protein S25.
    
 
 0.876
pus3
Pseudouridine synthase 3.
   
 
 0.873
ENSSTUP00000088155
Mitochondrial ribosomal protein S28.
   
 
 0.851
LOC115205177
Nitric oxide-associated protein 1-like.
   
 
 0.849
mrps14
Mitochondrial ribosomal protein S14.
    
   0.842
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.