close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sec63SEC63 homolog, protein translocation regulator. (757 aa)    
Predicted Functional Partners:
ENSSTUP00000011865
annotation not available
   
 0.999
LOC115150803
Protein transport protein Sec61 subunit alpha.
   
 
 0.999
ENSSTUP00000052694
annotation not available
    
 
 0.999
SEC61A1
Protein transport protein Sec61 subunit alpha.
   
 
 0.999
LOC115150543
Protein transport protein Sec61 subunit alpha-like.
   
 
 0.999
LOC115207623
Protein transport protein Sec61 subunit alpha.
   
 
 0.999
sec62
SEC62 homolog, preprotein translocation factor.
   
 0.999
ENSSTUP00000103469
SEC61 translocon beta subunit.
    
 
 0.999
LOC115157064
Protein transport protein Sec61 subunit gamma-like.
    
 
 0.993
ENSSTUP00000066870
SEC61 translocon gamma subunit.
    
 
 0.993
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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