STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000001835Epithelial splicing regulatory protein 2. (754 aa)    
Predicted Functional Partners:
LOC115198070
RNA-binding protein with multiple splicing-like.
    
 
 0.742
ENSSTUP00000023405
Heterogeneous nuclear ribonucleoprotein M.
     
 0.567
LOC115158186
Heterogeneous nuclear ribonucleoprotein M-like.
     
 0.567
ENSSTUP00000075153
Polymerase (RNA) II (DNA directed) polypeptide K.
     
 0.526
ENSSTUP00000081664
annotation not available
     
 0.526
bsnd
Barttin CLCNK type accessory beta subunit.
      
 0.497
LOC115151875
DNA-directed RNA polymerase II subunit RPB3.
     
 0.490
LOC115151875-2
DNA-directed RNA polymerase II subunit RPB3.
     
 0.490
LOC115156663
Protein quaking-B-like.
    
 0.462
qki
QKI, KH domain containing RNA binding.
    
 0.462
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.