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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000001839annotation not available (454 aa)    
Predicted Functional Partners:
mtif2
Mitochondrial translational initiation factor 2.
  
 0.958
LOC115148829
39S ribosomal protein L22, mitochondrial-like.
   
 
 0.946
mrpl3
Mitochondrial ribosomal protein L3.
   
 
 0.932
mrps14
Mitochondrial ribosomal protein S14.
   
 
 0.929
MRPL58
Mitochondrial ribosomal protein L58.
  
 
 0.926
mrps6
Mitochondrial ribosomal protein S6.
  
 
 0.923
ENSSTUP00000036414
Eukaryotic translation initiation factor 5B.
  
 0.917
ENSSTUP00000107711
Eukaryotic translation initiation factor 5B.
  
 0.917
yars1
tyrosyl-tRNA synthetase 1.
  
 
 0.903
LOC115197191
39S ribosomal protein L23, mitochondrial.
   
   0.901
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.