Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000001853annotation not available (531 aa)    
Predicted Functional Partners:
cd3e
CD3e molecule.
   
 0.935
ENSSTUP00000078752
annotation not available
   
 0.935
CD247
T-cell surface glycoprotein CD3 zeta chain-like.
   
 0.873
ENSSTUP00000031441
annotation not available
   
 0.873
LOC115179451
T-cell surface glycoprotein CD3 zeta chain-like.
   
 0.873
LOC115192548
Tyrosine-protein kinase ZAP-70-like.
  
 0.764
syk
Spleen associated tyrosine kinase.
  
 0.764
LOC115158333
Tyrosine-protein kinase ZAP-70-like.
  
 0.764
LOC115150216
T-cell surface glycoprotein CD8 alpha chain-like.
   
 0.745
LOC115165009
Protein HIRA.
    
 0.642
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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