Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
glipr1GLI pathogenesis related 1. (280 aa)    
Predicted Functional Partners:
ENSSTUP00000000158
Cytochrome b5 reductase 4.
     
 0.788
CYB5R4
Cytochrome b5 reductase 4-like.
     
 0.788
ENSSTUP00000011835
Phosphoribosylglycinamide formyltransferase.
    
  0.758
gart
annotation not available
    
  0.758
ENSSTUP00000001111
ATP/GTP binding protein-like 5.
      
 0.698
CCT2
T-complex protein 1 subunit beta.
   
 
 0.687
LOC115189926
T-complex protein 1 subunit beta.
   
 
 0.687
nanp
N-acetylneuraminic acid phosphatase.
     
 0.652
mettl1
Methyltransferase like 1.
     
 0.649
ENSSTUP00000069501
annotation not available
     
 0.649
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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