Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000001893annotation not available (129 aa)    
Predicted Functional Partners:
LOC115169621
cAMP-dependent protein kinase catalytic subunit beta-like.
   
 0.958
LOC115157154
cAMP-dependent protein kinase catalytic subunit beta.
   
 0.958
LOC115171557
cAMP-dependent protein kinase catalytic subunit alpha.
   
 0.947
prkacb
Protein kinase cAMP-activated catalytic subunit beta.
   
 0.947
ENSSTUP00000055834
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b.
   
 0.947
LOC115171557-2
cAMP-dependent protein kinase catalytic subunit alpha.
   
 0.947
LOC115196000
cAMP-dependent protein kinase catalytic subunit PRKX-like.
   
 0.912
LOC115179196
cAMP-dependent protein kinase catalytic subunit PRKX-like.
   
 0.912
ENSSTUP00000058430
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b.
   
 0.891
ENSSTUP00000074574
Protein kinase, cAMP-dependent, regulatory, type II, alpha, B.
     
  0.881
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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