Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115191782FRAS1-related extracellular matrix protein 2-like. (3157 aa)    
Predicted Functional Partners:
ENSSTUP00000013834
Fraser extracellular matrix complex subunit 1.
   
 0.867
ENSSTUP00000019007
Fraser extracellular matrix complex subunit 1.
   
 0.867
frem1
FRAS1 related extracellular matrix 1.
   
 0.853
LOC115158038
FRAS1-related extracellular matrix protein 1-like.
   
 0.853
LOC115191715
Nephronectin-like.
    
  0.807
LOC115202306
Nephronectin-like.
    
  0.807
ENSSTUP00000001683
annotation not available
   
  0.716
LOC115169781
Ubiquitin-like protein FUBI.
   
  0.716
ENSSTUP00000060436
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
  0.716
ENSSTUP00000077803
FAU ubiquitin like and ribosomal protein S30 fusion b.
   
  0.716
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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