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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115191782FRAS1-related extracellular matrix protein 2-like. (3157 aa)    
Predicted Functional Partners:
ENSSTUP00000001683
annotation not available
   
  0.921
LOC115169781
Ubiquitin-like protein FUBI.
   
  0.921
ENSSTUP00000060436
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
  0.921
ENSSTUP00000077803
FAU ubiquitin like and ribosomal protein S30 fusion b.
   
  0.921
frem1
FRAS1 related extracellular matrix 1.
   
0.908
LOC115158038
FRAS1-related extracellular matrix protein 1-like.
   
0.908
ENSSTUP00000013834
Fraser extracellular matrix complex subunit 1.
   
0.905
ENSSTUP00000019007
Fraser extracellular matrix complex subunit 1.
   
0.905
LOC115191715
Nephronectin-like.
    
  0.839
LOC115202306
Nephronectin-like.
    
  0.839
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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