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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115175934Dual specificity protein kinase Ttk-like. (1008 aa)    
Predicted Functional Partners:
nuf2
NUF2 component of NDC80 kinetochore complex.
   
 
 0.995
LOC115164996
Kinetochore protein NDC80 homolog.
   
 
 0.995
ENSSTUP00000083680
NDC80 kinetochore complex component.
   
 
 0.995
ENSSTUP00000005286
annotation not available
    
 0.992
LOC115198132
Mitotic spindle assembly checkpoint protein MAD2A-like.
   
 
 0.992
ENSSTUP00000048839
annotation not available
    
 0.992
LOC115194121
Mitotic spindle assembly checkpoint protein MAD2A-like.
   
 
 0.992
LOC115172676
Mitotic checkpoint serine/threonine-protein kinase BUB1 beta-like.
   
 
 0.969
ENSSTUP00000059318
annotation not available
   
 
 0.969
LOC115201385
Disks large-associated protein 5-like.
   
  
 0.968
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.