Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC115175934Dual specificity protein kinase Ttk-like. (1008 aa)    
Predicted Functional Partners:
nuf2
NUF2 component of NDC80 kinetochore complex.
   
 
 0.990
ENSSTUP00000005286
annotation not available
    
 0.987
ENSSTUP00000048839
annotation not available
    
 0.987
LOC115164996
Kinetochore protein NDC80 homolog.
   
 
 0.979
ENSSTUP00000083680
NDC80 kinetochore complex component.
   
 
 0.979
LOC115198132
Mitotic spindle assembly checkpoint protein MAD2A-like.
   
 
 0.976
LOC115194121
Mitotic spindle assembly checkpoint protein MAD2A-like.
   
 
 0.976
LOC115172676
Mitotic checkpoint serine/threonine-protein kinase BUB1 beta-like.
   
 
 0.973
ENSSTUP00000059318
annotation not available
   
 
 0.973
ENSSTUP00000054069
annotation not available
   
 
 0.968
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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