Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC115207564NLR family CARD domain-containing protein 3-like. (915 aa)    
Predicted Functional Partners:
sugt1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
    
  0.643
ENSSTUP00000082882
PYD and CARD domain containing.
   
 0.589
LOC115177037
Apoptosis-associated speck-like protein containing a CARD.
   
 0.589
LOC115156654
Apoptosis-associated speck-like protein containing a CARD.
   
 0.589
wdr90
WD repeat domain 90.
   
   0.584
ENSSTUP00000001504
annotation not available
   
  0.581
LOC115192187
Serine/threonine-protein kinase Nek7.
    
  0.581
ENSSTUP00000005821
annotation not available
   
  0.581
NEK6
Serine/threonine-protein kinase Nek6-like.
    
  0.581
ENSSTUP00000055300
annotation not available
    
  0.581
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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