Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC115191370Histidine triad nucleotide-binding protein 3-like. (163 aa)    
Predicted Functional Partners:
suox
Sulfite oxidase.
  
  0.885
dmac2l
Distal membrane arm assembly complex 2 like.
   
    0.601
fbxo15
F-box protein 15.
    
   0.599
LOC115159635
F-box only protein 15-like.
    
   0.599
hmgcr
3-hydroxy-3-methylglutaryl-CoA reductase.
      
 0.557
LOC115159718
3-hydroxy-3-methylglutaryl-coenzyme A reductase-like.
      
 0.557
msmo1
Methylsterol monooxygenase 1.
     
 0.551
LOC115203068
lysine--tRNA ligase-like.
   
 0.517
LOC115167274
lysine--tRNA ligase-like.
   
 0.517
ENSSTUP00000002043
TBP-like 1.
   
  0.495
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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