Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSSTUP00000001915Nuclear factor of activated T cells 3a. (1156 aa)    
Predicted Functional Partners:
ENSSTUP00000078150
Mitogen-activated protein kinase 10.
    
 0.948
LOC115174527
Mitogen-activated protein kinase 9-like.
    
 0.922
LOC115204538
Mitogen-activated protein kinase 9-like.
    
 0.922
LOC115152965
Mitogen-activated protein kinase 8-like.
    
 0.910
LOC115201108
Mitogen-activated protein kinase 8-like.
    
 0.910
ENSSTUP00000063905
Mitogen-activated protein kinase 8b.
    
 0.910
ENSSTUP00000082285
Mitogen-activated protein kinase 8a.
    
 0.910
LOC115177589
Calcineurin subunit B type 1.
    
 0.908
LOC115177589-2
Calcineurin subunit B type 1.
    
 0.908
LOC115156000-2
Calcineurin subunit B type 1-like.
    
 0.908
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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