Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mtfr2Mitochondrial fission regulator 2. (371 aa)    
Predicted Functional Partners:
tatdn2
TatD DNase domain containing 2.
      
 0.692
slc12a8
Solute carrier family 12 member 8.
      
 0.692
LOC115199797
Pescadillo homolog.
   
 0.607
PES1
Pescadillo homolog.
   
 0.607
ENSSTUP00000012855
WD repeat domain 18.
   
 0.598
wdr18
WD repeat domain 18.
   
 0.598
LOC115180981
Testis-expressed protein 10 homolog.
    
 0.595
LOC115180981-2
Testis-expressed protein 10 homolog.
    
 0.595
LOC115192037
Meiotic nuclear division protein 1 homolog.
   
    0.587
MND1
Meiotic nuclear divisions 1.
   
    0.587
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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