Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000001935annotation not available (202 aa)    
Predicted Functional Partners:
ENSSTUP00000038527
histidyl-tRNA synthetase.
    
 
 0.737
hars1
histidyl-tRNA synthetase 1.
    
 
 0.737
sox30
SRY-box transcription factor 30.
      
 0.646
trnt1
tRNA nucleotidyl transferase 1.
  
  
 0.632
ENSSTUP00000078868
annotation not available
  
  
 0.632
itpa
Inosine triphosphatase.
   
  
 0.627
LOC115159622
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase.
  
  
 0.621
trpt1
tRNA phosphotransferase 1.
     
 0.613
ENSSTUP00000113805
annotation not available
   
  
 0.607
ENSSTUP00000063489
Molybdenum cofactor synthesis 3.
   
 
 0.594
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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