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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115171030Eukaryotic translation initiation factor 1. (119 aa)    
Predicted Functional Partners:
ENSSTUP00000001683
annotation not available
   
 
 0.996
LOC115169781
Ubiquitin-like protein FUBI.
   
 
 0.996
ENSSTUP00000060436
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
 
 0.996
ENSSTUP00000077803
FAU ubiquitin like and ribosomal protein S30 fusion b.
   
 
 0.996
LOC115200975
Eukaryotic translation initiation factor 3 subunit C.
   
 0.994
eif3i
Eukaryotic translation initiation factor 3 subunit I.
   
 0.994
LOC115177639
Eukaryotic translation initiation factor 3 subunit B-like.
   
 0.994
LOC115181687
Eukaryotic translation initiation factor 3 subunit B-like.
   
 0.994
ENSSTUP00000095445
annotation not available
   
 0.994
ENSSTUP00000102767
Eukaryotic translation initiation factor 3, subunit C.
   
 0.994
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.