Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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[Homology]
Score
LOC115194727Protein phosphatase 1K, mitochondrial-like. (431 aa)    
Predicted Functional Partners:
bckdha
Branched chain keto acid dehydrogenase E1 subunit alpha.
  
 0.988
LOC115175927
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial-like.
   
 0.973
LOC115151630
annotation not available
   
 0.973
LOC115158067
annotation not available
   
 0.973
LOC115177377
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial-like.
   
 0.973
nme8
NME/NM23 family member 8.
   
 0.822
LOC115155393
Thioredoxin domain-containing protein 3 homolog.
   
 0.822
LOC115197019
Dihydrolipoyl dehydrogenase, mitochondrial-like.
  
 0.784
LOC115192726
Dihydrolipoyl dehydrogenase, mitochondrial-like.
  
 0.784
LOC115162780
Inhibitor of nuclear factor kappa-B kinase subunit alpha-like.
   
 0.767
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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