Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
Experiments
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[Homology]
Score
LOC11520105126S proteasome non-ATPase regulatory subunit 11B. (433 aa)    
Predicted Functional Partners:
ENSSTUP00000015333
Proteasome 26S subunit, non-ATPase 8.
   
 0.995
psma5
Proteasome 20S subunit alpha 5.
   
 0.993
PSMD13
Proteasome 26S subunit, non-ATPase 13.
   
 0.992
LOC115166718
26S proteasome non-ATPase regulatory subunit 13-like.
   
 0.992
PSMC5
26S proteasome regulatory subunit 8-like.
   
 0.991
psmc5
Proteasome 26S subunit, ATPase 5.
   
 0.991
ENSSTUP00000017801
Proteasome 26S subunit, ATPase 3.
   
 0.990
LOC115202889
26S proteasome regulatory subunit 6A-B-like.
   
 0.990
ENSSTUP00000032082
Proteasome 26S subunit, non-ATPase 3.
   
 0.990
LOC115150764
26S proteasome non-ATPase regulatory subunit 6.
   
 0.990
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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