Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000001969annotation not available (841 aa)    
Predicted Functional Partners:
XPO6
Exportin-6-like.
    
 
 0.833
ENSSTUP00000066469
Exportin 6.
    
 
 0.833
LOC115207856
ruvB-like 1.
   
 
 0.769
LOC115150553
ruvB-like 1.
   
 
 0.769
LOC115204360
Radial spoke head protein 6 homolog A-like.
    
 
 0.751
LOC115154749
Radial spoke head protein 6 homolog A-like.
    
 
 0.751
ENSSTUP00000014078
Dynein, axonemal, intermediate chain 2b.
    
 
 0.737
ENSSTUP00000100335
Dynein, axonemal, intermediate chain 2b.
    
 
 0.737
cfap300
Cilia and flagella associated protein 300.
    
 
 0.719
CCDC39
Coiled-coil domain containing 39.
    
 
 0.702
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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