Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000001988Dynein, axonemal, heavy chain 6. (3908 aa)    
Predicted Functional Partners:
dnali1
Dynein axonemal light intermediate chain 1.
  
 0.955
dnai1
Dynein axonemal intermediate chain 1.
   
 0.939
ENSSTUP00000014078
Dynein, axonemal, intermediate chain 2b.
   
 0.910
ENSSTUP00000100335
Dynein, axonemal, intermediate chain 2b.
   
 0.910
dnal1
Dynein axonemal light chain 1.
    
 0.881
ENSSTUP00000012473
annotation not available
    
 0.873
ENSSTUP00000012502
annotation not available
    
 0.873
LOC115151077
Dynactin subunit 2-like.
    
 0.873
ENSSTUP00000066882
annotation not available
    
 0.872
ENSSTUP00000002169
annotation not available
   
 0.860
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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