Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC115191717Hydroperoxide isomerase ALOXE3-like. (668 aa)    
Predicted Functional Partners:
ENSSTUP00000028362
Arachidonate 5-lipoxygenase-activating protein.
   
 0.927
LOC115204605
Arachidonate 5-lipoxygenase-activating protein-like.
   
 0.927
LOC115198687
Leukotriene A-4 hydrolase-like.
     
 0.903
ENSSTUP00000032107
MAPK activated protein kinase 2b.
    
  0.903
LOC115166326
MAP kinase-activated protein kinase 2-like.
    
  0.903
ENSSTUP00000083109
annotation not available
    
  0.903
LOC115180638
Leukotriene A-4 hydrolase-like.
     
 0.903
ENSSTUP00000036256
annotation not available
    
  0.879
LOC115162797
Phospholipase B1, membrane-associated-like.
     
  0.873
LOC115151899
Coactosin-like protein.
    
 
 0.872
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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