Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC115155940Pantothenate kinase 1-like. (469 aa)    
Predicted Functional Partners:
coasy
Coenzyme A synthase.
     
 0.956
ppcdc
Phosphopantothenoylcysteine decarboxylase.
     
 0.913
ENSSTUP00000062717
Phosphopantothenoylcysteine synthetase.
     
 0.885
ppcs
Phosphopantothenoylcysteine synthetase.
     
 0.885
LOC115205900
NLR family member X1-like.
    
  0.844
ENSSTUP00000094580
annotation not available
     
  0.835
dhx33
DEAH-box helicase 33.
     
 0.827
dcakd
dephospho-CoA kinase domain containing.
     
 0.827
LOC115171139
Max-like protein X.
     
 0.822
LOC115198241
Max-like protein X.
     
 0.822
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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