Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSSTUP00000002153Solute carrier family 35 member A3a. (304 aa)    
Predicted Functional Partners:
LOC115164994
melanopsin-A-like.
      
 0.593
ENSSTUP00000017834
Major facilitator superfamily domain containing 10.
      
 0.588
ENSSTUP00000008528
DDRGK domain containing 1.
      
 0.587
tmem165
Transmembrane protein 165.
  
  
 0.569
TMEM165
Transmembrane protein 165-like.
  
  
 0.569
pno1
Partner of NOB1 homolog.
   
  
 0.559
LOC115159524
Histone-lysine N-methyltransferase Smyd1-like.
     
 0.555
chid1
Chitinase domain containing 1.
      
 0.544
slc35a5
Solute carrier family 35 member A5.
   
  
 0.540
ENSSTUP00000010210
annotation not available
      
 0.523
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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