Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
B3GALT2Beta-1,3-galactosyltransferase 2-like. (433 aa)    
Predicted Functional Partners:
b4galt3
Beta-1,4-galactosyltransferase 3.
   
 
 0.953
LOC115192312
CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like.
     
 0.886
LOC115192478
Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A-like.
     
  0.874
LOC115154807
Beta-1,4-galactosyltransferase 4-like.
   
 
 0.874
LOC115169761
Beta-1,4-galactosyltransferase 2-like.
   
 
 0.874
LOC115177496
Beta-1,4-galactosyltransferase 3-like.
   
 
 0.874
LOC115177059
Beta-1,4-galactosyltransferase 3-like.
   
 
 0.874
LOC115157009
Beta-1,4-galactosyltransferase 2-like.
   
 
 0.874
LOC115204411
Beta-1,4-galactosyltransferase 4-like.
   
 
 0.874
LOC115156719
CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like.
     
 0.867
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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