Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115158965S-adenosylmethionine synthase-like. (394 aa)    
Predicted Functional Partners:
mat2b
Methionine adenosyltransferase 2B.
  
 0.987
gnmt
Glycine N-methyltransferase.
   
 
 0.933
LOC115203928
Betaine--homocysteine S-methyltransferase 1.
  
 
 0.893
LOC115159735
Betaine--homocysteine S-methyltransferase 1-like.
  
 
 0.893
AMD1
Adenosylmethionine decarboxylase 1.
   
 
 0.888
LOC115194087
S-adenosylmethionine decarboxylase proenzyme-like.
   
 
 0.888
LOC115151432
Homocysteine S-methyltransferase-like.
  
 
 0.886
LOC115151432-2
Homocysteine S-methyltransferase-like.
  
 
 0.886
ENSSTUP00000056085
DNA (cytosine-5-)-methyltransferase 3 alpha a.
     
 0.878
LOC115168944
Methylenetetrahydrofolate reductase-like.
  
 
 0.878
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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