Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115196011Ras-related protein ralB-B-like. (203 aa)    
Predicted Functional Partners:
ENSSTUP00000077925
ralA binding protein 1.
    
 0.978
LOC115192287
Exocyst complex component 2-like.
    
 0.957
LOC115158638
Exocyst complex component 2-like.
    
 0.957
LOC115192569
Ral guanine nucleotide dissociation stimulator-like 1.
    
 0.898
rgl1
Ral guanine nucleotide dissociation stimulator like 1.
    
 0.898
LOC115199764
Ras GTPase-activating protein 1-like.
   
 0.886
LOC115164902
Ras GTPase-activating protein 1-like.
   
 0.886
afdn
Afadin, adherens junction formation factor.
    
 0.883
AFDN
Afadin, adherens junction formation factor.
    
 0.883
LOC115174527
Mitogen-activated protein kinase 9-like.
   
 0.875
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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