STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000002231Selenoprotein U1b. (143 aa)    
Predicted Functional Partners:
LOC115200838
Putative protein PTGES3L.
   
 
 0.542
LOC115158282
Putative protein PTGES3L.
   
 
 0.542
ENSSTUP00000046173
Microsomal glutathione S-transferase 1.1.
     
 0.541
MGST1
Microsomal glutathione S-transferase 1.
     
 0.541
LOC115203729
Prostaglandin E synthase-like.
     
 0.541
ptges
Prostaglandin E synthase.
     
 0.541
LOC115205084
Glutathione S-transferase P-like.
     
 0.485
GSTP1
Glutathione S-transferase P-like.
     
 0.485
GSTM4
Glutathione S-transferase Mu 3-like.
   
 
 0.485
ENSSTUP00000051125
annotation not available
     
 0.485
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.